{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 211604226, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 200189489, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 94.61, 
            "paired": 211604226, 
            "paired_qc_failed": 0, 
            "read1": 105802113, 
            "read1_qc_failed": 0, 
            "read2": 105802113, 
            "read2_qc_failed": 0, 
            "paired_properly": 194289446, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 91.82, 
            "with_itself": 197210361, 
            "with_itself_qc_failed": 0, 
            "singletons": 2979128, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.41, 
            "diff_chroms": 1377542, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 239432188, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 231429253, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.66, 
            "paired": 239432188, 
            "paired_qc_failed": 0, 
            "read1": 119716094, 
            "read1_qc_failed": 0, 
            "read2": 119716094, 
            "read2_qc_failed": 0, 
            "paired_properly": 226374121, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.55, 
            "with_itself": 229579189, 
            "with_itself_qc_failed": 0, 
            "singletons": 1850064, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.77, 
            "diff_chroms": 2056124, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 74976632, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 9704113, 
            "paired_opt_dupes": 39727, 
            "dupes_pct": 0.129428
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 93939937, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 11899048, 
            "paired_opt_dupes": 28578, 
            "dupes_pct": 0.126667
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 74975268, 
            "distinct_read_pairs": 65271334, 
            "one_read_pair": 56659245, 
            "two_read_pair": 7632172, 
            "NRF": 0.870572, 
            "PBC1": 0.868057, 
            "PBC2": 7.423738
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 93919009, 
            "distinct_read_pairs": 82022723, 
            "one_read_pair": 71424617, 
            "two_read_pair": 9428354, 
            "NRF": 0.873335, 
            "PBC1": 0.870791, 
            "PBC2": 7.575513
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 130545038, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 130545038, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 130545038, 
            "paired_qc_failed": 0, 
            "read1": 65272519, 
            "read1_qc_failed": 0, 
            "read2": 65272519, 
            "read2_qc_failed": 0, 
            "paired_properly": 130545038, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 130545038, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 164081778, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 164081778, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 164081778, 
            "paired_qc_failed": 0, 
            "read1": 82040889, 
            "read1_qc_failed": 0, 
            "read2": 82040889, 
            "read2_qc_failed": 0, 
            "paired_properly": 164081778, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 164081778, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 167769, 
        "Np": 0, 
        "N_opt": 167769, 
        "N_consv": 167769, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": -20, 
            "corr_est_frag_len": 0.18405805678032, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2104878, 
            "argmin_corr": 1500, 
            "min_corr": 0.1782045, 
            "NSC": 1.032847, 
            "RSC": 0.181318
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.255155233996
        }, 
        "rep1-pr1": {
            "FRiP": 0.203913696631
        }, 
        "rep1-pr2": {
            "FRiP": 0.203916929291
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.146543098077
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.273003295713, 
            "auc": 0.495643738188, 
            "ch_div": 0.105624693876, 
            "elbow_pt": 0.0, 
            "jsd": 0.572983076938, 
            "syn_auc": 0.503626070967, 
            "syn_elbow_pt": 0.160090206305, 
            "syn_jsd": 0.291556041859
        }
    ]
}