/EXTERNAL DEEP/K006115_K006116_K006117_K006118_4_lane_gembs/43_Hm03.Bisulfite-Seq.DNA_methylation.EGAX00001422767.43

BACK

SAMPLE K006115_K006116_K006117_K006118_4_lane_gembs LANE 43_Hm03.Bisulfite-Seq.DNA_methylation.EGAX00001422767.43

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 377699968 100.00 % 188849984 100.00 % 188849984 100.00 %
General Reads 371819387 98.44 % 186663554 98.84 % 185155833 98.04 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 1848394 0.49 % 928770 0.49 % 919624 0.49 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 4032187 1.07 % 1257660 0.67 % 2774527 1.47 %
Bisulfite_reads C2T 191936268 50.82 % 96346652 51.02 % 95589616 50.62 %
Bisulfite_reads G2A 181731513 48.12 % 91245672 48.32 % 90485841 47.91 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 156852490
Average Unique 83.06 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 15070833656 39.51 % 6087545401 31.92 % 8983288255 47.10 %
Base Counts Overall C 3856178804 10.11 % 197739956 1.04 % 3658438848 19.18 %
Base Counts Overall G 3903816258 10.23 % 3714711402 19.48 % 189104856 0.99 %
Base Counts Overall T 14908344097 39.08 % 8884499763 46.58 % 6023844334 31.58 %
Base Counts Overall N 408523953 1.07 % 189351862 0.99 % 219172091 1.15 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9826084351998644
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 179676736



Mapping Quality

Mapping Quality Histogram
43_Hm03.Bisulfite-Seq.DNA_methylation.EGAX00001422767.43.mapq.png



Read Length

Read Length Reads
100 188849984
100 188849984



Insert Size Plot

Insert Size Histogram
43_Hm03.Bisulfite-Seq.DNA_methylation.EGAX00001422767.43.isize.png