{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 58845628, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 57445890, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.62, 
            "paired": 58845628, 
            "paired_qc_failed": 0, 
            "read1": 29422814, 
            "read1_qc_failed": 0, 
            "read2": 29422814, 
            "read2_qc_failed": 0, 
            "paired_properly": 56591504, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.17, 
            "with_itself": 57181047, 
            "with_itself_qc_failed": 0, 
            "singletons": 264843, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.45, 
            "diff_chroms": 141989, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 149933526, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 146624545, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.79, 
            "paired": 149933526, 
            "paired_qc_failed": 0, 
            "read1": 74966763, 
            "read1_qc_failed": 0, 
            "read2": 74966763, 
            "read2_qc_failed": 0, 
            "paired_properly": 143525972, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.73, 
            "with_itself": 145761822, 
            "with_itself_qc_failed": 0, 
            "singletons": 862723, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.58, 
            "diff_chroms": 564786, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 26038794, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1711228, 
            "paired_opt_dupes": 8464, 
            "dupes_pct": 0.065718
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 63655918, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1138162, 
            "paired_opt_dupes": 22681, 
            "dupes_pct": 0.01788
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 26033236, 
            "distinct_read_pairs": 24322379, 
            "one_read_pair": 22705079, 
            "two_read_pair": 1528098, 
            "NRF": 0.934282, 
            "PBC1": 0.933506, 
            "PBC2": 14.858392
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 63588650, 
            "distinct_read_pairs": 62452487, 
            "one_read_pair": 61334967, 
            "two_read_pair": 1100229, 
            "NRF": 0.982133, 
            "PBC1": 0.982106, 
            "PBC2": 55.747455
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 48655132, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 48655132, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 48655132, 
            "paired_qc_failed": 0, 
            "read1": 24327566, 
            "read1_qc_failed": 0, 
            "read2": 24327566, 
            "read2_qc_failed": 0, 
            "paired_properly": 48655132, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 48655132, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 125035512, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 125035512, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 125035512, 
            "paired_qc_failed": 0, 
            "read1": 62517756, 
            "read1_qc_failed": 0, 
            "read2": 62517756, 
            "read2_qc_failed": 0, 
            "paired_properly": 125035512, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 125035512, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 31082, 
        "Np": 0, 
        "N_opt": 31082, 
        "N_consv": 31082, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 175, 
            "corr_est_frag_len": 0.496302428845667, 
            "phantom_peak": 55, 
            "corr_phantom_peak": 0.4532176, 
            "argmin_corr": 1500, 
            "min_corr": 0.1816712, 
            "NSC": 2.731872, 
            "RSC": 1.158665
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.646659646246
        }, 
        "rep1-pr1": {
            "FRiP": 0.645062983146
        }, 
        "rep1-pr2": {
            "FRiP": 0.645390923536
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.640016566636
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0941071930247, 
            "auc": 0.494128702983, 
            "ch_div": 0.229503116766, 
            "elbow_pt": 8.27441542613e-249, 
            "jsd": 0.929178045494, 
            "syn_auc": 0.501254717097, 
            "syn_elbow_pt": 0.598012655993, 
            "syn_jsd": 0.642958762923
        }
    ]
}