{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 131420930, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 125291217, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.34, 
            "paired": 131420930, 
            "paired_qc_failed": 0, 
            "read1": 65710465, 
            "read1_qc_failed": 0, 
            "read2": 65710465, 
            "read2_qc_failed": 0, 
            "paired_properly": 122013873, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 92.84, 
            "with_itself": 123807652, 
            "with_itself_qc_failed": 0, 
            "singletons": 1483565, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.13, 
            "diff_chroms": 349679, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 155278814, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 152204810, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.02, 
            "paired": 155278814, 
            "paired_qc_failed": 0, 
            "read1": 77639407, 
            "read1_qc_failed": 0, 
            "read2": 77639407, 
            "read2_qc_failed": 0, 
            "paired_properly": 149315055, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.16, 
            "with_itself": 151298295, 
            "with_itself_qc_failed": 0, 
            "singletons": 906515, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.58, 
            "diff_chroms": 1045401, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 42887463, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1283167, 
            "paired_opt_dupes": 10197, 
            "dupes_pct": 0.029919
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 66029859, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1524871, 
            "paired_opt_dupes": 14661, 
            "dupes_pct": 0.023094
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 42887051, 
            "distinct_read_pairs": 41603900, 
            "one_read_pair": 40357686, 
            "two_read_pair": 1213860, 
            "NRF": 0.970081, 
            "PBC1": 0.970046, 
            "PBC2": 33.247398
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 65968445, 
            "distinct_read_pairs": 64445697, 
            "one_read_pair": 62945345, 
            "two_read_pair": 1479272, 
            "NRF": 0.976917, 
            "PBC1": 0.976719, 
            "PBC2": 42.551569
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 83208592, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 83208592, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 83208592, 
            "paired_qc_failed": 0, 
            "read1": 41604296, 
            "read1_qc_failed": 0, 
            "read2": 41604296, 
            "read2_qc_failed": 0, 
            "paired_properly": 83208592, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 83208592, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 129009976, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 129009976, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 129009976, 
            "paired_qc_failed": 0, 
            "read1": 64504988, 
            "read1_qc_failed": 0, 
            "read2": 64504988, 
            "read2_qc_failed": 0, 
            "paired_properly": 129009976, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 129009976, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 223084, 
        "Np": 0, 
        "N_opt": 223084, 
        "N_consv": 223084, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 125, 
            "corr_est_frag_len": 0.217466798734528, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2650785, 
            "argmin_corr": 1500, 
            "min_corr": 0.2070315, 
            "NSC": 1.050404, 
            "RSC": 0.1797731
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.497390629244
        }, 
        "rep1-pr1": {
            "FRiP": 0.430308120152
        }, 
        "rep1-pr2": {
            "FRiP": 0.434801112396
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.393685195378
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.170548874979, 
            "auc": 0.495528927901, 
            "ch_div": 0.204060416438, 
            "elbow_pt": 0.0, 
            "jsd": 0.687279960815, 
            "syn_auc": 0.506364641477, 
            "syn_elbow_pt": 0.314216272056, 
            "syn_jsd": 0.43525474237
        }
    ]
}