{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 67125298, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 65946249, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.24, 
            "paired": 67125298, 
            "paired_qc_failed": 0, 
            "read1": 33562649, 
            "read1_qc_failed": 0, 
            "read2": 33562649, 
            "read2_qc_failed": 0, 
            "paired_properly": 65089521, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.97, 
            "with_itself": 65648216, 
            "with_itself_qc_failed": 0, 
            "singletons": 298033, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.44, 
            "diff_chroms": 71926, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 175026970, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 171819448, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.17, 
            "paired": 175026970, 
            "paired_qc_failed": 0, 
            "read1": 87513485, 
            "read1_qc_failed": 0, 
            "read2": 87513485, 
            "read2_qc_failed": 0, 
            "paired_properly": 168294620, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.15, 
            "with_itself": 170965028, 
            "with_itself_qc_failed": 0, 
            "singletons": 854420, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.49, 
            "diff_chroms": 1256632, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 29907355, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1357055, 
            "paired_opt_dupes": 6543, 
            "dupes_pct": 0.045375
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 74970360, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1349605, 
            "paired_opt_dupes": 20203, 
            "dupes_pct": 0.018002
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 29901464, 
            "distinct_read_pairs": 28544704, 
            "one_read_pair": 27237236, 
            "two_read_pair": 1259819, 
            "NRF": 0.954626, 
            "PBC1": 0.954196, 
            "PBC2": 21.61996
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 74828889, 
            "distinct_read_pairs": 73485563, 
            "one_read_pair": 72156748, 
            "two_read_pair": 1315961, 
            "NRF": 0.982048, 
            "PBC1": 0.981917, 
            "PBC2": 54.831981
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 57100600, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 57100600, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 57100600, 
            "paired_qc_failed": 0, 
            "read1": 28550300, 
            "read1_qc_failed": 0, 
            "read2": 28550300, 
            "read2_qc_failed": 0, 
            "paired_properly": 57100600, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 57100600, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 147241510, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 147241510, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 147241510, 
            "paired_qc_failed": 0, 
            "read1": 73620755, 
            "read1_qc_failed": 0, 
            "read2": 73620755, 
            "read2_qc_failed": 0, 
            "paired_properly": 147241510, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 147241510, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 30624, 
        "Np": 0, 
        "N_opt": 30624, 
        "N_consv": 30624, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 180, 
            "corr_est_frag_len": 0.398601184231351, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.3848134, 
            "argmin_corr": 1500, 
            "min_corr": 0.2336285, 
            "NSC": 1.706132, 
            "RSC": 1.091198
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.598418326566
        }, 
        "rep1-pr1": {
            "FRiP": 0.592679328537
        }, 
        "rep1-pr2": {
            "FRiP": 0.592779837549
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.587125723917
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.115759981079, 
            "auc": 0.494591756573, 
            "ch_div": 0.174865551091, 
            "elbow_pt": 1.49336165724e-293, 
            "jsd": 0.908664707411, 
            "syn_auc": 0.49825047707, 
            "syn_elbow_pt": 0.549389569802, 
            "syn_jsd": 0.602159965164
        }
    ]
}