/EXTERNAL CREST/K006466_K006467_2_lane_gembs/JKU016.Bisulfite-Seq.DNA_Methylation.JGAX00000016056.JKU016_WGBS
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1633640836 | 100.00 % | 816820418 | 100.00 % | 816820418 | 100.00 % |
| General Reads | 1535620392 | 94.00 % | 786207708 | 96.25 % | 749412684 | 91.75 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 7336093 | 0.45 % | 3534089 | 0.43 % | 3802004 | 0.47 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 90684351 | 5.55 % | 27078621 | 3.32 % | 63605730 | 7.79 % |
| Bisulfite_reads C2T | 785713811 | 48.10 % | 402450302 | 49.27 % | 383263509 | 46.92 % |
| Bisulfite_reads G2A | 757242674 | 46.35 % | 387291495 | 47.41 % | 369951179 | 45.29 % |
| Concept | Value |
|---|---|
| Unique Fragments | 321813450 |
| Average Unique | 39.40 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 60596004349 | 36.37 % | 39049802659 | 46.87 % | 21546201690 | 25.86 % |
| Base Counts Overall C | 21639958419 | 12.99 % | 19599867686 | 23.52 % | 2040090733 | 2.45 % |
| Base Counts Overall G | 23064830097 | 13.84 % | 1416495445 | 1.70 % | 21648334652 | 25.98 % |
| Base Counts Overall T | 59672701950 | 35.81 % | 22420021492 | 26.91 % | 37252680458 | 44.71 % |
| Base Counts Overall N | 1657870457 | 0.99 % | 829495354 | 1.00 % | 828375103 | 0.99 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.988374982920349 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 438074869 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 101 | 816820418 |
| 101 | 816820418 |
| Insert Size Histogram |
|---|
 |