/EXTERNAL CREST/K006466_K006467_2_lane_gembs/JKU016.Bisulfite-Seq.DNA_Methylation.JGAX00000016057.JKU016_WGBS

BACK

SAMPLE K006466_K006467_2_lane_gembs LANE JKU016.Bisulfite-Seq.DNA_Methylation.JGAX00000016057.JKU016_WGBS

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 305877193 100.00 % 305877193 100.00 % 0 0.00 %
General Reads 293900921 96.08 % 293900921 96.08 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 3085514 1.01 % 3085514 1.01 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 8890758 2.91 % 8890758 2.91 % 0 0.00 %
Bisulfite_reads C2T 147362292 48.18 % 147362292 48.18 % 0 0.00 %
Bisulfite_reads G2A 149624143 48.92 % 149624143 48.92 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 216852516
Average Unique 73.02 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 14198689725 45.51 %
Base Counts Overall C 7363460312 23.60 %
Base Counts Overall G 623424143 2.00 %
Base Counts Overall T 8703727082 27.90 %
Base Counts Overall N 310172424 0.99 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.8872359816573423
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
JKU016.Bisulfite-Seq.DNA_Methylation.JGAX00000016057.JKU016_WGBS.mapq.png



Read Length

Read Length Reads
101 305877193