/EXTERNAL CREST/K006466_K006467_2_lane_gembs
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1939518029 | 100.00 % | 1122697611 | 100.00 % | 816820418 | 100.00 % |
| General Reads | 1829521313 | 94.33 % | 1080108629 | 96.21 % | 749412684 | 91.75 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 10421607 | 0.54 % | 6619603 | 0.59 % | 3802004 | 0.47 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 99575109 | 5.13 % | 35969379 | 3.20 % | 63605730 | 7.79 % |
| Bisulfite_reads C2T | 933076103 | 48.11 % | 549812594 | 48.97 % | 383263509 | 46.92 % |
| Bisulfite_reads G2A | 906866817 | 46.76 % | 536915638 | 47.82 % | 369951179 | 45.29 % |
| Concept | Value |
|---|---|
| Unique Fragments | 538665966 |
| Average Unique | 48.36 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 74794694074 | 37.81 % | 53248492384 | 46.50 % | 21546201690 | 25.86 % |
| Base Counts Overall C | 29003418731 | 14.66 % | 26963327998 | 23.55 % | 2040090733 | 2.45 % |
| Base Counts Overall G | 23688254240 | 11.97 % | 2039919588 | 1.78 % | 21648334652 | 25.98 % |
| Base Counts Overall T | 68376429032 | 34.56 % | 31123748574 | 27.18 % | 37252680458 | 44.71 % |
| Base Counts Overall N | 1968042881 | 0.99 % | 1139667778 | 1.00 % | 828375103 | 0.99 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9863637605413436 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 438074869 |
| Mapping Quality Histogram |
|---|
| |
| Insert Size Histogram |
|---|
 |
| LANE REPORTS |
|---|
| JKU016.Bisulfite-Seq.DNA_Methylation.JGAX00000016056.JKU016_WGBS |
| JKU016.Bisulfite-Seq.DNA_Methylation.JGAX00000016057.JKU016_WGBS |