/EXTERNAL CREST/methylation/K006466_K006467_2_lane_gembs
BACK
SAMPLE K006466_K006467_2_lane_gembs
CpG counts
| Type |
Total |
Pass |
% |
| RefCpG |
25666560 |
13735070 |
53.51 % |
| NonRefCpG |
457760 |
69102 |
15.10 % |
Coverage CpGs
| Coverage Reference CpGs |
Coverage Information Reads Reference CpGs |
 |
 |
| Coverage Non Reference CpGs |
Coverage Information Reads Non-Reference CpGs |
 |
 |
Quality CpGs
| Genotype Quality Phred scaled Reference CpGs |
Genotype Quality Phred scaled Non-Reference CpGs |
 |
 |
Methylation CpGs
| CpGs Methylation Distribution |
 |
CpG Methylation Profile (From Individual Strands)
| Type |
#AllReferenceCpG |
% |
#PassedReferenceCpG |
% |
#AllNonReferenceCpG |
% |
#PassedNonReferenceCpG |
% |
| Unmethylated (0-0.3) |
15944675 |
32.32 % |
10435340 |
30.48 % |
381365 |
46.79 % |
90569 |
32.56 % |
| Intermediate (0.3-0.7) |
19855336 |
40.24 % |
13106278 |
38.28 % |
281994 |
34.60 % |
110760 |
39.82 % |
| Methylated (0.7-1) |
13537727 |
27.44 % |
10698656 |
31.25 % |
151694 |
18.61 % |
76805 |
27.61 % |
| |
|
|
|
|
|
|
|
|
| Median Methylation |
0.480 |
|
0.510 |
|
0.340 |
|
0.470 |
|