/EXTERNAL CREST/K006449_1_lane_gembs/JKU013.Bisulfite-Seq.DNA_Methylation.JGAX00000011802_2

BACK

SAMPLE K006449_1_lane_gembs LANE JKU013.Bisulfite-Seq.DNA_Methylation.JGAX00000011802_2

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1728378941 100.00 % 1728378941 100.00 % 0 0.00 %
General Reads 1663941740 96.27 % 1663941740 96.27 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 8555957 0.50 % 8555957 0.50 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 55881244 3.23 % 55881244 3.23 % 0 0.00 %
Bisulfite_reads C2T 831330732 48.10 % 831330732 48.10 % 0 0.00 %
Bisulfite_reads G2A 841166965 48.67 % 841166965 48.67 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 1221068987
Average Unique 73.01 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 87941119725 47.68 %
Base Counts Overall C 40691159868 22.06 %
Base Counts Overall G 3515750347 1.91 %
Base Counts Overall T 50294888778 27.27 %
Base Counts Overall N 2013445859 1.09 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.8787018268940693
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
JKU013.Bisulfite-Seq.DNA_Methylation.JGAX00000011802_2.mapq.png



Read Length

Read Length Reads
116 544114173
101 1184264768