{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 147326520, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 145413214, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.7, 
            "paired": 147326520, 
            "paired_qc_failed": 0, 
            "read1": 73663260, 
            "read1_qc_failed": 0, 
            "read2": 73663260, 
            "read2_qc_failed": 0, 
            "paired_properly": 143625894, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 97.49, 
            "with_itself": 144750305, 
            "with_itself_qc_failed": 0, 
            "singletons": 662909, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.45, 
            "diff_chroms": 261910, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 186476942, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 181693684, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.43, 
            "paired": 186476942, 
            "paired_qc_failed": 0, 
            "read1": 93238471, 
            "read1_qc_failed": 0, 
            "read2": 93238471, 
            "read2_qc_failed": 0, 
            "paired_properly": 178059283, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.49, 
            "with_itself": 180553291, 
            "with_itself_qc_failed": 0, 
            "singletons": 1140393, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.61, 
            "diff_chroms": 425639, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 64699094, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1273294, 
            "paired_opt_dupes": 9318, 
            "dupes_pct": 0.01968
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 78591287, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1772322, 
            "paired_opt_dupes": 10324, 
            "dupes_pct": 0.022551
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 64697799, 
            "distinct_read_pairs": 63424527, 
            "one_read_pair": 62170376, 
            "two_read_pair": 1235341, 
            "NRF": 0.98032, 
            "PBC1": 0.980226, 
            "PBC2": 50.32649
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 78496784, 
            "distinct_read_pairs": 76728433, 
            "one_read_pair": 75011080, 
            "two_read_pair": 1678659, 
            "NRF": 0.977472, 
            "PBC1": 0.977618, 
            "PBC2": 44.685121
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 126851600, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 126851600, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 126851600, 
            "paired_qc_failed": 0, 
            "read1": 63425800, 
            "read1_qc_failed": 0, 
            "read2": 63425800, 
            "read2_qc_failed": 0, 
            "paired_properly": 126851600, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 126851600, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 153637930, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 153637930, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 153637930, 
            "paired_qc_failed": 0, 
            "read1": 76818965, 
            "read1_qc_failed": 0, 
            "read2": 76818965, 
            "read2_qc_failed": 0, 
            "paired_properly": 153637930, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 153637930, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 198421, 
        "Np": 0, 
        "N_opt": 198421, 
        "N_consv": 198421, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 165, 
            "corr_est_frag_len": 0.172151828153761, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1742143, 
            "argmin_corr": 1500, 
            "min_corr": 0.1709608, 
            "NSC": 1.006967, 
            "RSC": 0.3660765
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.239805166544
        }, 
        "rep1-pr1": {
            "FRiP": 0.218043561948
        }, 
        "rep1-pr2": {
            "FRiP": 0.218214363377
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.147480979283
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.284236411283, 
            "auc": 0.496371413416, 
            "ch_div": 0.100237904838, 
            "elbow_pt": 0.0, 
            "jsd": 0.562207117153, 
            "syn_auc": 0.499027684593, 
            "syn_elbow_pt": 0.140299307795, 
            "syn_jsd": 0.27795925885
        }
    ]
}
