{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 165932488, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 163869495, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.76, 
            "paired": 165932488, 
            "paired_qc_failed": 0, 
            "read1": 82966244, 
            "read1_qc_failed": 0, 
            "read2": 82966244, 
            "read2_qc_failed": 0, 
            "paired_properly": 161539140, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 97.35, 
            "with_itself": 162471795, 
            "with_itself_qc_failed": 0, 
            "singletons": 1397700, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.84, 
            "diff_chroms": 203142, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 172537646, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 169623970, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.31, 
            "paired": 172537646, 
            "paired_qc_failed": 0, 
            "read1": 86268823, 
            "read1_qc_failed": 0, 
            "read2": 86268823, 
            "read2_qc_failed": 0, 
            "paired_properly": 167189082, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.9, 
            "with_itself": 168209596, 
            "with_itself_qc_failed": 0, 
            "singletons": 1414374, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.82, 
            "diff_chroms": 219888, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 73940610, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 6538024, 
            "paired_opt_dupes": 2689, 
            "dupes_pct": 0.088423
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 73240672, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 4951100, 
            "paired_opt_dupes": 3081, 
            "dupes_pct": 0.0676
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 73939782, 
            "distinct_read_pairs": 67401825, 
            "one_read_pair": 61361569, 
            "two_read_pair": 5577331, 
            "NRF": 0.911577, 
            "PBC1": 0.910384, 
            "PBC2": 11.001959
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 73151550, 
            "distinct_read_pairs": 68207516, 
            "one_read_pair": 63530412, 
            "two_read_pair": 4426047, 
            "NRF": 0.932414, 
            "PBC1": 0.931428, 
            "PBC2": 14.353759
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 134805172, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 134805172, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 134805172, 
            "paired_qc_failed": 0, 
            "read1": 67402586, 
            "read1_qc_failed": 0, 
            "read2": 67402586, 
            "read2_qc_failed": 0, 
            "paired_properly": 134805172, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 134805172, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 136579144, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 136579144, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 136579144, 
            "paired_qc_failed": 0, 
            "read1": 68289572, 
            "read1_qc_failed": 0, 
            "read2": 68289572, 
            "read2_qc_failed": 0, 
            "paired_properly": 136579144, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 136579144, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 247238, 
        "Np": 0, 
        "N_opt": 247238, 
        "N_consv": 247238, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 155, 
            "corr_est_frag_len": 0.182527681537251, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1832911, 
            "argmin_corr": 1500, 
            "min_corr": 0.1804874, 
            "NSC": 1.011304, 
            "RSC": 0.7277166
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.635689865859
        }, 
        "rep1-pr1": {
            "FRiP": 0.578455839506
        }, 
        "rep1-pr2": {
            "FRiP": 0.578497796825
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.557826955376
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.156017309267, 
            "auc": 0.496495585668, 
            "ch_div": 0.18010811805, 
            "elbow_pt": 0.0, 
            "jsd": 0.697953194161, 
            "syn_auc": 0.496638328376, 
            "syn_elbow_pt": 0.370995972963, 
            "syn_jsd": 0.481251973396
        }
    ]
}