/EXTERNAL CREST/K006443_1_lane_gembs/JKU005.Bisulfite-Seq.DNA_Methylation.JGAX00000011748.JKU005_WGBS
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1905930264 | 100.00 % | 952965132 | 100.00 % | 952965132 | 100.00 % |
| General Reads | 1772376647 | 92.99 % | 912466903 | 95.75 % | 859909744 | 90.24 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 15278771 | 0.80 % | 7432641 | 0.78 % | 7846130 | 0.82 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 118274846 | 6.21 % | 33065588 | 3.47 % | 85209258 | 8.94 % |
| Bisulfite_reads C2T | 911322281 | 47.82 % | 469240435 | 49.24 % | 442081846 | 46.39 % |
| Bisulfite_reads G2A | 876333137 | 45.98 % | 450659109 | 47.29 % | 425674028 | 44.67 % |
| Concept | Value |
|---|---|
| Unique Fragments | 391677037 |
| Average Unique | 41.10 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 70273224150 | 36.15 % | 43993134977 | 45.26 % | 26280089173 | 27.04 % |
| Base Counts Overall C | 27104723704 | 13.94 % | 23129731684 | 23.80 % | 3974992020 | 4.09 % |
| Base Counts Overall G | 27100116607 | 13.94 % | 2189328114 | 2.25 % | 24910788493 | 25.63 % |
| Base Counts Overall T | 67998990858 | 34.98 % | 26926269495 | 27.70 % | 41072721363 | 42.25 % |
| Base Counts Overall N | 1927831609 | 0.99 % | 963979194 | 0.99 % | 963852415 | 0.99 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9857662330307541 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 523187106 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 101 | 952965132 |
| 101 | 952965132 |
| Insert Size Histogram |
|---|
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