{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 164382230, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 161648559, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.34, 
            "paired": 164382230, 
            "paired_qc_failed": 0, 
            "read1": 82191115, 
            "read1_qc_failed": 0, 
            "read2": 82191115, 
            "read2_qc_failed": 0, 
            "paired_properly": 159288691, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.9, 
            "with_itself": 160644902, 
            "with_itself_qc_failed": 0, 
            "singletons": 1003657, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.61, 
            "diff_chroms": 353794, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 194166736, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 188427054, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.04, 
            "paired": 194166736, 
            "paired_qc_failed": 0, 
            "read1": 97083368, 
            "read1_qc_failed": 0, 
            "read2": 97083368, 
            "read2_qc_failed": 0, 
            "paired_properly": 183258385, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.38, 
            "with_itself": 186937146, 
            "with_itself_qc_failed": 0, 
            "singletons": 1489908, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.77, 
            "diff_chroms": 1235264, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 70167111, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1164810, 
            "paired_opt_dupes": 9334, 
            "dupes_pct": 0.016601
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 80987770, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1179794, 
            "paired_opt_dupes": 10644, 
            "dupes_pct": 0.014568
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 70165950, 
            "distinct_read_pairs": 69001163, 
            "one_read_pair": 67851062, 
            "two_read_pair": 1135601, 
            "NRF": 0.9834, 
            "PBC1": 0.983332, 
            "PBC2": 59.749033
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 80909491, 
            "distinct_read_pairs": 79732095, 
            "one_read_pair": 78571982, 
            "two_read_pair": 1145607, 
            "NRF": 0.985448, 
            "PBC1": 0.98545, 
            "PBC2": 68.585459
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 138004602, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 138004602, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 138004602, 
            "paired_qc_failed": 0, 
            "read1": 69002301, 
            "read1_qc_failed": 0, 
            "read2": 69002301, 
            "read2_qc_failed": 0, 
            "paired_properly": 138004602, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 138004602, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 159615952, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 159615952, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 159615952, 
            "paired_qc_failed": 0, 
            "read1": 79807976, 
            "read1_qc_failed": 0, 
            "read2": 79807976, 
            "read2_qc_failed": 0, 
            "paired_properly": 159615952, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 159615952, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 169583, 
        "Np": 0, 
        "N_opt": 169583, 
        "N_consv": 169583, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": -5, 
            "corr_est_frag_len": 0.177087238905573, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.185835, 
            "argmin_corr": 1500, 
            "min_corr": 0.1741837, 
            "NSC": 1.016669, 
            "RSC": 0.2492021
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.258727276814
        }, 
        "rep1-pr1": {
            "FRiP": 0.214594640751
        }, 
        "rep1-pr2": {
            "FRiP": 0.214508286107
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.167078002729
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.292777898893, 
            "auc": 0.496522558876, 
            "ch_div": 0.0957466588031, 
            "elbow_pt": 0.0, 
            "jsd": 0.568832155459, 
            "syn_auc": 0.504717777153, 
            "syn_elbow_pt": 0.127937493996, 
            "syn_jsd": 0.264410872939
        }
    ]
}
