{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 73428262, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 71182596, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.94, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 71581120, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 70131205, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.97, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 59241748, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3695041, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.062372
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 57714031, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1313193, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.022753
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 59240899, 
            "distinct_read_pairs": 55823329, 
            "one_read_pair": 52605729, 
            "two_read_pair": 3030598, 
            "NRF": 0.942311, 
            "PBC1": 0.942361, 
            "PBC2": 17.358201
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 57640774, 
            "distinct_read_pairs": 56432345, 
            "one_read_pair": 55313141, 
            "two_read_pair": 1095224, 
            "NRF": 0.979035, 
            "PBC1": 0.980167, 
            "PBC2": 50.503953
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 55546707, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 55546707, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 56400838, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 56400838, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 240347, 
        "Np": 0, 
        "N_opt": 240347, 
        "N_consv": 240347, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 155, 
            "corr_est_frag_len": 0.190921453087451, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1887453, 
            "argmin_corr": 1500, 
            "min_corr": 0.1830274, 
            "NSC": 1.043131, 
            "RSC": 1.380577
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.479539046621
        }, 
        "rep1-pr1": {
            "FRiP": 0.425246663472
        }, 
        "rep1-pr2": {
            "FRiP": 0.424988946083
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.399294216402
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.164620654122, 
            "auc": 0.493306869517, 
            "ch_div": 0.201513858039, 
            "elbow_pt": 4.31041160622e-191, 
            "jsd": 0.710591608204, 
            "syn_auc": 0.504445888272, 
            "syn_elbow_pt": 0.320915669126, 
            "syn_jsd": 0.438835707505
        }
    ]
}