{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 67570315, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 65435757, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.84, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 71581120, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 70131205, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.97, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 58098925, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 8869699, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.152665
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 57714031, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1313193, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.022753
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 58089873, 
            "distinct_read_pairs": 49881120, 
            "one_read_pair": 42745625, 
            "two_read_pair": 6203119, 
            "NRF": 0.858689, 
            "PBC1": 0.85695, 
            "PBC2": 6.890989
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 57640774, 
            "distinct_read_pairs": 56432345, 
            "one_read_pair": 55313141, 
            "two_read_pair": 1095224, 
            "NRF": 0.979035, 
            "PBC1": 0.980167, 
            "PBC2": 50.503953
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 49229226, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 49229226, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 56400838, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 56400838, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 170920, 
        "Np": 0, 
        "N_opt": 170920, 
        "N_consv": 170920, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 175, 
            "corr_est_frag_len": 0.211938158238313, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2075118, 
            "argmin_corr": 1500, 
            "min_corr": 0.1797823, 
            "NSC": 1.17886, 
            "RSC": 1.159627
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.641870925361
        }, 
        "rep1-pr1": {
            "FRiP": 0.615539640114
        }, 
        "rep1-pr2": {
            "FRiP": 0.615744285273
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.61374303005
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.115584711376, 
            "auc": 0.492904799147, 
            "ch_div": 0.207639665, 
            "elbow_pt": 6.68991416975e-170, 
            "jsd": 0.831092468896, 
            "syn_auc": 0.502911094435, 
            "syn_elbow_pt": 0.456274984502, 
            "syn_jsd": 0.548178262488
        }
    ]
}