{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 58284483, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 55578709, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.36, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 56247908, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 55215775, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.17, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 41183141, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1073698, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.026071
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 48312304, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1044870, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.021627
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 41172869, 
            "distinct_read_pairs": 40131375, 
            "one_read_pair": 39276233, 
            "two_read_pair": 821247, 
            "NRF": 0.974704, 
            "PBC1": 0.978691, 
            "PBC2": 47.825116
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 47994153, 
            "distinct_read_pairs": 47259761, 
            "one_read_pair": 46602233, 
            "two_read_pair": 642210, 
            "NRF": 0.984698, 
            "PBC1": 0.986087, 
            "PBC2": 72.565412
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 40109443, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 40109443, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 47267434, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 47267434, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 134399, 
        "Np": 0, 
        "N_opt": 134399, 
        "N_consv": 134399, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 190, 
            "corr_est_frag_len": 0.189339615996146, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.2171562, 
            "argmin_corr": 1500, 
            "min_corr": 0.1799586, 
            "NSC": 1.052129, 
            "RSC": 0.2521946
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.307048403563
        }, 
        "rep1-pr1": {
            "FRiP": 0.253984947361
        }, 
        "rep1-pr2": {
            "FRiP": 0.252885696826
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.225157885358
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.221315451743, 
            "auc": 0.493568458401, 
            "ch_div": 0.137115735261, 
            "elbow_pt": 4.27084856633e-207, 
            "jsd": 0.662972633633, 
            "syn_auc": 0.505540229184, 
            "syn_elbow_pt": 0.223013877903, 
            "syn_jsd": 0.357987472383
        }
    ]
}