{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 31515759, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 30190280, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.79, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 28132793, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 27350651, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.22, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 26458944, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3137156, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.118567
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 23952794, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 816909, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.034105
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 26456469, 
            "distinct_read_pairs": 23387721, 
            "one_read_pair": 21024651, 
            "two_read_pair": 1830006, 
            "NRF": 0.884008, 
            "PBC1": 0.898961, 
            "PBC2": 11.488843
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 23924819, 
            "distinct_read_pairs": 23140694, 
            "one_read_pair": 22413039, 
            "two_read_pair": 697286, 
            "NRF": 0.967225, 
            "PBC1": 0.968555, 
            "PBC2": 32.143251
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 23321788, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 23321788, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 23135885, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 23135885, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 22280, 
        "Np": 0, 
        "N_opt": 22280, 
        "N_consv": 22280, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 205, 
            "corr_est_frag_len": 0.161895278083608, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.1692106, 
            "argmin_corr": 1500, 
            "min_corr": 0.1556003, 
            "NSC": 1.040456, 
            "RSC": 0.4625167
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0598199596238
        }, 
        "rep1-pr1": {
            "FRiP": 0.0641894490905
        }, 
        "rep1-pr2": {
            "FRiP": 0.0642043721224
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0527182688528
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.29308756606, 
            "auc": 0.49156449586, 
            "ch_div": 0.12336706826, 
            "elbow_pt": 8.52262468788e-120, 
            "jsd": 0.541687492753, 
            "syn_auc": 0.496698393879, 
            "syn_elbow_pt": 0.0795382571923, 
            "syn_jsd": 0.239447325138
        }
    ]
}