{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 60954591, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 60149792, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.68, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 33459840, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32696197, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.72, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 54646314, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 7423940, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.135854
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 28744360, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 6913713, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.240524
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 54643391, 
            "distinct_read_pairs": 47413480, 
            "one_read_pair": 41198371, 
            "two_read_pair": 5333401, 
            "NRF": 0.867689, 
            "PBC1": 0.868917, 
            "PBC2": 7.724597
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 28585525, 
            "distinct_read_pairs": 21952682, 
            "one_read_pair": 16922998, 
            "two_read_pair": 3801741, 
            "NRF": 0.767965, 
            "PBC1": 0.770885, 
            "PBC2": 4.451381
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 47222374, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 47222374, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 21830647, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 21830647, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 64207, 
        "Np": 0, 
        "N_opt": 64207, 
        "N_consv": 64207, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 210, 
            "corr_est_frag_len": 0.168287916605273, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.1676196, 
            "argmin_corr": 1500, 
            "min_corr": 0.1655075, 
            "NSC": 1.016799, 
            "RSC": 1.316396
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0905467114867
        }, 
        "rep1-pr1": {
            "FRiP": 0.108653012698
        }, 
        "rep1-pr2": {
            "FRiP": 0.109340941979
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0596378608457
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.256715029049, 
            "auc": 0.494071984052, 
            "ch_div": 0.120533572183, 
            "elbow_pt": 4.87553245479e-244, 
            "jsd": 0.620197690413, 
            "syn_auc": 0.501320265737, 
            "syn_elbow_pt": 0.111527406504, 
            "syn_jsd": 0.302879039874
        }
    ]
}