{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 15462553, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 12804402, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 82.81, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 48062676, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 47430541, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.68, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 10752671, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 5115141, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.475709
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 38167124, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 6145956, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.161027
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 10748099, 
            "distinct_read_pairs": 5686929, 
            "one_read_pair": 2820762, 
            "two_read_pair": 1542249, 
            "NRF": 0.52911, 
            "PBC1": 0.496008, 
            "PBC2": 1.828993
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 38164176, 
            "distinct_read_pairs": 32469386, 
            "one_read_pair": 27689835, 
            "two_read_pair": 4057067, 
            "NRF": 0.850782, 
            "PBC1": 0.852798, 
            "PBC2": 6.825087
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 5637530, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 5637530, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 32021168, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32021168, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 63043, 
        "Np": 0, 
        "N_opt": 63043, 
        "N_consv": 63043, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 12796791, 
            "est_frag_len": 255, 
            "corr_est_frag_len": 0.100774791777465, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.0988479, 
            "argmin_corr": 1500, 
            "min_corr": 0.0910213, 
            "NSC": 1.107156, 
            "RSC": 1.246198
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.545848077197
        }, 
        "rep1-pr1": {
            "FRiP": 0.540568499478
        }, 
        "rep1-pr2": {
            "FRiP": 0.540844242698
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.491839846066
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0703152719336, 
            "auc": 0.477122665794, 
            "ch_div": 0.674009444713, 
            "elbow_pt": 1.06884081732e-15, 
            "jsd": 0.702825416755, 
            "syn_auc": 0.534003454222, 
            "syn_elbow_pt": 0.309916583551, 
            "syn_jsd": 0.405551766803
        }
    ]
}