{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 70233141, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 69216889, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.55, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 56642046, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 55397893, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.8, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 61487660, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 6542295, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.1064
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 44356900, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3332706, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.075134
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 61483440, 
            "distinct_read_pairs": 54965828, 
            "one_read_pair": 49094912, 
            "two_read_pair": 5336265, 
            "NRF": 0.893994, 
            "PBC1": 0.89319, 
            "PBC2": 9.200239
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 44344615, 
            "distinct_read_pairs": 41081176, 
            "one_read_pair": 38122388, 
            "two_read_pair": 2740435, 
            "NRF": 0.926407, 
            "PBC1": 0.927977, 
            "PBC2": 13.911072
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 54945365, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 54945365, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 41024194, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 41024194, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 48742, 
        "Np": 0, 
        "N_opt": 48742, 
        "N_consv": 48742, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 200, 
            "corr_est_frag_len": 0.17108474231407, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.1803518, 
            "argmin_corr": 1500, 
            "min_corr": 0.1671293, 
            "NSC": 1.023667, 
            "RSC": 0.2991429
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0790152295314
        }, 
        "rep1-pr1": {
            "FRiP": 0.0844193343009
        }, 
        "rep1-pr2": {
            "FRiP": 0.0846171431151
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0634262823628
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.310056715645, 
            "auc": 0.494514225215, 
            "ch_div": 0.100058379217, 
            "elbow_pt": 2.83200326084e-285, 
            "jsd": 0.566958162894, 
            "syn_auc": 0.499606347097, 
            "syn_elbow_pt": 0.0666944524058, 
            "syn_jsd": 0.231621331336
        }
    ]
}
