{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 44159459, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 43666104, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.88, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 72359114, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 71394229, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.67, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 36641521, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3932606, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.107326
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 57730437, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 21008010, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.363898
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 36640811, 
            "distinct_read_pairs": 32722449, 
            "one_read_pair": 29453051, 
            "two_read_pair": 2794549, 
            "NRF": 0.89306, 
            "PBC1": 0.900087, 
            "PBC2": 10.539465
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 57704316, 
            "distinct_read_pairs": 37254763, 
            "one_read_pair": 24411426, 
            "two_read_pair": 8158322, 
            "NRF": 0.645615, 
            "PBC1": 0.655257, 
            "PBC2": 2.992212
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 32708915, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32708915, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 36722427, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 36722427, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 42238, 
        "Np": 0, 
        "N_opt": 42238, 
        "N_consv": 42238, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 235, 
            "corr_est_frag_len": 0.255666345313547, 
            "phantom_peak": 45, 
            "corr_phantom_peak": 0.2282218, 
            "argmin_corr": 1500, 
            "min_corr": 0.1701117, 
            "NSC": 1.502932, 
            "RSC": 1.472287
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.293549021443
        }, 
        "rep1-pr1": {
            "FRiP": 0.278843967267
        }, 
        "rep1-pr2": {
            "FRiP": 0.278597852201
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.269662927532
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.208607317222, 
            "auc": 0.490620101541, 
            "ch_div": 0.149334031757, 
            "elbow_pt": 1.17761623951e-96, 
            "jsd": 0.72965408038, 
            "syn_auc": 0.509432157853, 
            "syn_elbow_pt": 0.285486301581, 
            "syn_jsd": 0.395785420609
        }
    ]
}
