{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 31600977, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 31297288, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.04, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 72359114, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 71394229, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.67, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 25905737, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3326298, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.1284
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 57730437, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 21008010, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.363898
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 25900623, 
            "distinct_read_pairs": 22584862, 
            "one_read_pair": 19668076, 
            "two_read_pair": 2577744, 
            "NRF": 0.871981, 
            "PBC1": 0.870852, 
            "PBC2": 7.629957
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 57704316, 
            "distinct_read_pairs": 37254763, 
            "one_read_pair": 24411426, 
            "two_read_pair": 8158322, 
            "NRF": 0.645615, 
            "PBC1": 0.655257, 
            "PBC2": 2.992212
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 22579439, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 22579439, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 36722427, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 36722427, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 34605, 
        "Np": 0, 
        "N_opt": 34605, 
        "N_consv": 34605, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 240, 
            "corr_est_frag_len": 0.191183033036243, 
            "phantom_peak": 45, 
            "corr_phantom_peak": 0.1885281, 
            "argmin_corr": 1500, 
            "min_corr": 0.1604996, 
            "NSC": 1.191175, 
            "RSC": 1.094722
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.196747432044
        }, 
        "rep1-pr1": {
            "FRiP": 0.186769544518
        }, 
        "rep1-pr2": {
            "FRiP": 0.186548703518
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.173659890646
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.231578635693, 
            "auc": 0.488709047851, 
            "ch_div": 0.168971198023, 
            "elbow_pt": 2.24388593295e-66, 
            "jsd": 0.637752062282, 
            "syn_auc": 0.514251934471, 
            "syn_elbow_pt": 0.210558272027, 
            "syn_jsd": 0.330438769572
        }
    ]
}