{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 33136413, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32831319, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.08, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 48062676, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 47430541, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.68, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 27405910, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3929511, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.143382
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 38167124, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 6145956, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.161027
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 27405188, 
            "distinct_read_pairs": 23487221, 
            "one_read_pair": 20037734, 
            "two_read_pair": 3038123, 
            "NRF": 0.857036, 
            "PBC1": 0.853133, 
            "PBC2": 6.595432
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 38164176, 
            "distinct_read_pairs": 32469386, 
            "one_read_pair": 27689835, 
            "two_read_pair": 4057067, 
            "NRF": 0.850782, 
            "PBC1": 0.852798, 
            "PBC2": 6.825087
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 23476399, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 23476399, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 32021168, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32021168, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 72288, 
        "Np": 0, 
        "N_opt": 72288, 
        "N_consv": 72288, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 210, 
            "corr_est_frag_len": 0.174609766565559, 
            "phantom_peak": 45, 
            "corr_phantom_peak": 0.1762215, 
            "argmin_corr": 1500, 
            "min_corr": 0.1651386, 
            "NSC": 1.057353, 
            "RSC": 0.8545712
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.313419330006
        }, 
        "rep1-pr1": {
            "FRiP": 0.28844632803
        }, 
        "rep1-pr2": {
            "FRiP": 0.289002560595
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.277693378779
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.197271322181, 
            "auc": 0.488941360621, 
            "ch_div": 0.19570189574, 
            "elbow_pt": 3.10118911739e-69, 
            "jsd": 0.684117926961, 
            "syn_auc": 0.494410940236, 
            "syn_elbow_pt": 0.234139093694, 
            "syn_jsd": 0.373794931473
        }
    ]
}