{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 32721335, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 31810042, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.21, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 48062676, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 47430541, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.68, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 26558171, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 8183718, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.308143
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 38167124, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 6145956, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.161027
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 26550717, 
            "distinct_read_pairs": 18519315, 
            "one_read_pair": 12656323, 
            "two_read_pair": 4240709, 
            "NRF": 0.697507, 
            "PBC1": 0.683412, 
            "PBC2": 2.984483
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 38164176, 
            "distinct_read_pairs": 32469386, 
            "one_read_pair": 27689835, 
            "two_read_pair": 4057067, 
            "NRF": 0.850782, 
            "PBC1": 0.852798, 
            "PBC2": 6.825087
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 18374453, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 18374453, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 32021168, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32021168, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 36213, 
        "Np": 0, 
        "N_opt": 36213, 
        "N_consv": 36213, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 275, 
            "corr_est_frag_len": 0.212809202725068, 
            "phantom_peak": 45, 
            "corr_phantom_peak": 0.1990015, 
            "argmin_corr": 1500, 
            "min_corr": 0.1557985, 
            "NSC": 1.365926, 
            "RSC": 1.3196
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.374489438979
        }, 
        "rep1-pr1": {
            "FRiP": 0.361209980492
        }, 
        "rep1-pr2": {
            "FRiP": 0.361263435823
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.354002546912
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.165820603736, 
            "auc": 0.487322257821, 
            "ch_div": 0.251504476442, 
            "elbow_pt": 1.88410951761e-52, 
            "jsd": 0.700012395686, 
            "syn_auc": 0.490610390749, 
            "syn_elbow_pt": 0.331170347381, 
            "syn_jsd": 0.430985037937
        }
    ]
}