{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 37239247, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 36803511, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.83, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 56642046, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 55397893, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.8, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 33962174, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2995441, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.088199
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 44356900, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3332706, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.075134
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 33958888, 
            "distinct_read_pairs": 30974950, 
            "one_read_pair": 28471214, 
            "two_read_pair": 2134779, 
            "NRF": 0.912131, 
            "PBC1": 0.919169, 
            "PBC2": 13.336844
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 44344615, 
            "distinct_read_pairs": 41081176, 
            "one_read_pair": 38122388, 
            "two_read_pair": 2740435, 
            "NRF": 0.926407, 
            "PBC1": 0.927977, 
            "PBC2": 13.911072
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 30966733, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 30966733, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 41024194, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 41024194, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 46150, 
        "Np": 0, 
        "N_opt": 46150, 
        "N_consv": 46150, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 175, 
            "corr_est_frag_len": 0.303101539239243, 
            "phantom_peak": 80, 
            "corr_phantom_peak": 0.2818797, 
            "argmin_corr": 1500, 
            "min_corr": 0.1997849, 
            "NSC": 1.517139, 
            "RSC": 1.258504
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.408307497529
        }, 
        "rep1-pr1": {
            "FRiP": 0.395602298864
        }, 
        "rep1-pr2": {
            "FRiP": 0.395450275954
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.385969324902
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.167575588651, 
            "auc": 0.492692764665, 
            "ch_div": 0.155805156585, 
            "elbow_pt": 4.24124157775e-160, 
            "jsd": 0.79182127891, 
            "syn_auc": 0.495330091011, 
            "syn_elbow_pt": 0.363339970596, 
            "syn_jsd": 0.478533028829
        }
    ]
}
