{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 35971920, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 35612501, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 72359114, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 71394229, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.67, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 29719082, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3972697, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.133675
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 57730437, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 21008010, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.363898
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 29718639, 
            "distinct_read_pairs": 25757576, 
            "one_read_pair": 22590029, 
            "two_read_pair": 2634058, 
            "NRF": 0.866715, 
            "PBC1": 0.877025, 
            "PBC2": 8.576132
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 57704316, 
            "distinct_read_pairs": 37254763, 
            "one_read_pair": 24411426, 
            "two_read_pair": 8158322, 
            "NRF": 0.645615, 
            "PBC1": 0.655257, 
            "PBC2": 2.992212
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 25746385, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 25746385, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 36722427, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 36722427, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 29834, 
        "Np": 0, 
        "N_opt": 29834, 
        "N_consv": 29834, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 270, 
            "corr_est_frag_len": 0.276276143201968, 
            "phantom_peak": 45, 
            "corr_phantom_peak": 0.2112752, 
            "argmin_corr": 1500, 
            "min_corr": 0.1706577, 
            "NSC": 1.618891, 
            "RSC": 2.600315
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.270352064174
        }, 
        "rep1-pr1": {
            "FRiP": 0.260870548064
        }, 
        "rep1-pr2": {
            "FRiP": 0.26077865025
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.257309954467
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.213829553526, 
            "auc": 0.489424218293, 
            "ch_div": 0.162109585864, 
            "elbow_pt": 8.50615348701e-76, 
            "jsd": 0.717402343984, 
            "syn_auc": 0.518626060656, 
            "syn_elbow_pt": 0.286527284073, 
            "syn_jsd": 0.385176947192
        }
    ]
}