{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 29144876, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 27439724, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 94.15, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 56642046, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 55397893, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.8, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 25233669, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3573092, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.1416
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 44356900, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3332706, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.075134
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 25230899, 
            "distinct_read_pairs": 21855348, 
            "one_read_pair": 19051296, 
            "two_read_pair": 2355184, 
            "NRF": 0.866214, 
            "PBC1": 0.8717, 
            "PBC2": 8.08909
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 44344615, 
            "distinct_read_pairs": 41081176, 
            "one_read_pair": 38122388, 
            "two_read_pair": 2740435, 
            "NRF": 0.926407, 
            "PBC1": 0.927977, 
            "PBC2": 13.911072
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 21660577, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 21660577, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 41024194, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 41024194, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 48451, 
        "Np": 0, 
        "N_opt": 48451, 
        "N_consv": 48451, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 175, 
            "corr_est_frag_len": 0.315406419551359, 
            "phantom_peak": 80, 
            "corr_phantom_peak": 0.2875408, 
            "argmin_corr": 1500, 
            "min_corr": 0.1787645, 
            "NSC": 1.764369, 
            "RSC": 1.256174
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.434983534434
        }, 
        "rep1-pr1": {
            "FRiP": 0.423171237908
        }, 
        "rep1-pr2": {
            "FRiP": 0.4233013892
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.405657129214
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.139618120365, 
            "auc": 0.491233764674, 
            "ch_div": 0.247358929657, 
            "elbow_pt": 7.6967877201e-111, 
            "jsd": 0.794326397108, 
            "syn_auc": 0.5138604826, 
            "syn_elbow_pt": 0.378912819671, 
            "syn_jsd": 0.493314466663
        }
    ]
}