/EXTERNAL BLUEPRINT/K011723_1_lane_gembs/EXTERNAL-K011723_1894665_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 129775160 | 100.00 % | 64887580 | 100.00 % | 64887580 | 100.00 % |
| General Reads | 123784173 | 95.38 % | 62171276 | 95.81 % | 61612897 | 94.95 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5990987 | 4.62 % | 2716304 | 4.19 % | 3274683 | 5.05 % |
| Bisulfite_reads C2T | 64036893 | 49.34 % | 32155416 | 49.56 % | 31881477 | 49.13 % |
| Bisulfite_reads G2A | 59747280 | 46.04 % | 30015860 | 46.26 % | 29731420 | 45.82 % |
| Concept | Value |
|---|---|
| Unique Fragments | 47059811 |
| Average Unique | 72.53 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 3550829066 | 35.53 % | 1369044161 | 27.40 % | 2181784905 | 43.67 % |
| Base Counts Overall C | 1396729972 | 13.98 % | 176071314 | 3.52 % | 1220658658 | 24.43 % |
| Base Counts Overall G | 1436826876 | 14.38 % | 1229977234 | 24.62 % | 206849642 | 4.14 % |
| Base Counts Overall T | 3476425720 | 34.79 % | 2155052969 | 43.13 % | 1321372751 | 26.45 % |
| Base Counts Overall N | 131875686 | 1.32 % | 66197982 | 1.32 % | 65677704 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 57752074 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 64887580 |
| 76 | 64887580 |
| Insert Size Histogram |
|---|
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