/EXTERNAL BLUEPRINT/K011724_1_lane_gembs/EXTERNAL-K011724_1894666_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 96337672 | 100.00 % | 48168836 | 100.00 % | 48168836 | 100.00 % |
| General Reads | 92631660 | 96.15 % | 46526844 | 96.59 % | 46104816 | 95.72 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 5 | 0.00 % | 3 | 0.00 % | 2 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3706007 | 3.85 % | 1641989 | 3.41 % | 2064018 | 4.28 % |
| Bisulfite_reads C2T | 47979153 | 49.80 % | 24094726 | 50.02 % | 23884427 | 49.58 % |
| Bisulfite_reads G2A | 44652512 | 46.35 % | 22432121 | 46.57 % | 22220391 | 46.13 % |
| Concept | Value |
|---|---|
| Unique Fragments | 35206987 |
| Average Unique | 73.09 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 2662318549 | 35.89 % | 1021792005 | 27.55 % | 1640526544 | 44.23 % |
| Base Counts Overall C | 1028220833 | 13.86 % | 127184319 | 3.43 % | 901036514 | 24.29 % |
| Base Counts Overall G | 1047883438 | 14.13 % | 905283140 | 24.41 % | 142600298 | 3.84 % |
| Base Counts Overall T | 2583010205 | 34.82 % | 1606509795 | 43.31 % | 976500410 | 26.33 % |
| Base Counts Overall N | 96567719 | 1.30 % | 48231113 | 1.30 % | 48336606 | 1.30 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 43388148 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 48168836 |
| 76 | 48168836 |
| Insert Size Histogram |
|---|
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