/EXTERNAL BLUEPRINT/K010380_K011765_32libs_32_lane_gembs/EXTERNAL-K011745_1894687_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 42543176 | 100.00 % | 21271588 | 100.00 % | 21271588 | 100.00 % |
| General Reads | 16518997 | 38.83 % | 8319118 | 39.11 % | 8199879 | 38.55 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 50 | 0.00 % | 29 | 0.00 % | 21 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 26024129 | 61.17 % | 12952441 | 60.89 % | 13071688 | 61.45 % |
| Bisulfite_reads C2T | 8518666 | 20.02 % | 4288829 | 20.16 % | 4229837 | 19.88 % |
| Bisulfite_reads G2A | 8000381 | 18.81 % | 4030318 | 18.95 % | 3970063 | 18.66 % |
| Concept | Value |
|---|---|
| Unique Fragments | 6453192 |
| Average Unique | 30.34 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 885480370 | 27.03 % | 452232831 | 27.61 % | 433247539 | 26.45 % |
| Base Counts Overall C | 721879992 | 22.04 % | 366658664 | 22.39 % | 355221328 | 21.69 % |
| Base Counts Overall G | 732760863 | 22.37 % | 361496633 | 22.07 % | 371264230 | 22.67 % |
| Base Counts Overall T | 892654132 | 27.25 % | 436033584 | 26.62 % | 456620548 | 27.88 % |
| Base Counts Overall N | 43049195 | 1.31 % | 21490564 | 1.31 % | 21558631 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 7943027 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 21271588 |
| 76 | 21271588 |
| Insert Size Histogram |
|---|
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