/EXTERNAL BLUEPRINT/K010380_K011765_32libs_32_lane_gembs/EXTERNAL-K011748_1894690_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 105698744 | 100.00 % | 52849372 | 100.00 % | 52849372 | 100.00 % |
| General Reads | 43119072 | 40.79 % | 21695735 | 41.05 % | 21423337 | 40.54 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 73 | 0.00 % | 37 | 0.00 % | 36 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 62579599 | 59.21 % | 31153600 | 58.95 % | 31425999 | 59.46 % |
| Bisulfite_reads C2T | 22236458 | 21.04 % | 11185736 | 21.17 % | 11050722 | 20.91 % |
| Bisulfite_reads G2A | 20882687 | 19.76 % | 10510036 | 19.89 % | 10372651 | 19.63 % |
| Concept | Value |
|---|---|
| Unique Fragments | 16728602 |
| Average Unique | 31.65 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 2200156331 | 27.03 % | 1131353528 | 27.80 % | 1068802803 | 26.26 % |
| Base Counts Overall C | 1791013599 | 22.01 % | 911181811 | 22.39 % | 879831788 | 21.62 % |
| Base Counts Overall G | 1823825173 | 22.41 % | 896167411 | 22.02 % | 927657762 | 22.80 % |
| Base Counts Overall T | 2216845059 | 27.24 % | 1077306745 | 26.47 % | 1139538314 | 28.00 % |
| Base Counts Overall N | 106963126 | 1.31 % | 53392149 | 1.31 % | 53570977 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 20631609 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 52849372 |
| 76 | 52849372 |
| Insert Size Histogram |
|---|
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