/EXTERNAL BLUEPRINT/K010380_K011765_32libs_32_lane_gembs/EXTERNAL-K011750_1894692_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 32941544 | 100.00 % | 16470772 | 100.00 % | 16470772 | 100.00 % |
| General Reads | 12349570 | 37.49 % | 6208338 | 37.69 % | 6141232 | 37.29 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 65 | 0.00 % | 33 | 0.00 % | 32 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 20591909 | 62.51 % | 10262401 | 62.31 % | 10329508 | 62.71 % |
| Bisulfite_reads C2T | 6366221 | 19.33 % | 3199938 | 19.43 % | 3166283 | 19.22 % |
| Bisulfite_reads G2A | 5983414 | 18.16 % | 3008433 | 18.27 % | 2974981 | 18.06 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4638185 |
| Average Unique | 28.16 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 687467909 | 27.10 % | 339532315 | 26.77 % | 347935594 | 27.43 % |
| Base Counts Overall C | 561225589 | 22.13 % | 287741680 | 22.69 % | 273483909 | 21.56 % |
| Base Counts Overall G | 576855595 | 22.74 % | 282934330 | 22.31 % | 293921265 | 23.18 % |
| Base Counts Overall T | 677611525 | 26.71 % | 341400629 | 26.92 % | 336210896 | 26.51 % |
| Base Counts Overall N | 33338270 | 1.31 % | 16640490 | 1.31 % | 16697780 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5733710 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 16470772 |
| 76 | 16470772 |
| Insert Size Histogram |
|---|
 |