/EXTERNAL BLUEPRINT/K010380_K011765_32libs_32_lane_gembs/EXTERNAL-K011764_1894706_2

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SAMPLE K010380_K011765_32libs_32_lane_gembs LANE EXTERNAL-K011764_1894706_2

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 25677414 100.00 % 12838707 100.00 % 12838707 100.00 %
General Reads 8914131 34.72 % 4489615 34.97 % 4424516 34.46 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 26 0.00 % 14 0.00 % 12 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 16763257 65.28 % 8349078 65.03 % 8414179 65.54 %
Bisulfite_reads C2T 4594722 17.89 % 2313778 18.02 % 2280944 17.77 %
Bisulfite_reads G2A 4319435 16.82 % 2175851 16.95 % 2143584 16.70 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 3446457
Average Unique 26.84 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 536740658 27.15 % 275434593 27.86 % 261306065 26.43 %
Base Counts Overall C 433450427 21.92 % 219048597 22.16 % 214401830 21.69 %
Base Counts Overall G 444418613 22.48 % 219854289 22.24 % 224564324 22.72 %
Base Counts Overall T 536565778 27.14 % 261272876 26.43 % 275292902 27.85 %
Base Counts Overall N 25985402 1.31 % 12970084 1.31 % 13015318 1.32 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate NA
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 4265185



Mapping Quality

Mapping Quality Histogram
EXTERNAL-K011764_1894706_2.mapq.png



Read Length

Read Length Reads
76 12838707
76 12838707



Insert Size Plot

Insert Size Histogram
EXTERNAL-K011764_1894706_2.isize.png