/EXTERNAL BLUEPRINT/methylation/K010380_K011765_32libs_32_lane_gembs
BACK
SAMPLE K010380_K011765_32libs_32_lane_gembs
CpG counts
| Type |
Total |
Pass |
% |
| RefCpG |
24222008 |
3889064 |
16.06 % |
| NonRefCpG |
582688 |
12101 |
2.08 % |
Coverage CpGs
| Coverage Reference CpGs |
Coverage Information Reads Reference CpGs |
 |
 |
| Coverage Non Reference CpGs |
Coverage Information Reads Non-Reference CpGs |
 |
 |
Quality CpGs
| Genotype Quality Phred scaled Reference CpGs |
Genotype Quality Phred scaled Non-Reference CpGs |
 |
 |
Methylation CpGs
| CpGs Methylation Distribution |
 |
CpG Methylation Profile (From Individual Strands)
| Type |
#AllReferenceCpG |
% |
#PassedReferenceCpG |
% |
#AllNonReferenceCpG |
% |
#PassedNonReferenceCpG |
% |
| Unmethylated (0-0.3) |
3792210 |
9.17 % |
235132 |
2.55 % |
249038 |
28.43 % |
3169 |
6.70 % |
| Intermediate (0.3-0.7) |
11496673 |
27.81 % |
1490509 |
16.16 % |
294520 |
33.62 % |
9794 |
20.72 % |
| Methylated (0.7-1) |
26047361 |
63.01 % |
7496173 |
81.29 % |
332422 |
37.95 % |
34312 |
72.58 % |
| |
|
|
|
|
|
|
|
|
| Median Methylation |
0.790 |
|
0.880 |
|
0.570 |
|
0.850 |
|