/EXTERNAL BLUEPRINT/K011727_K011729_K011730_K011731_K011732_K011733_K011734_K011735_K011736_K011766_K011767_11_lane_gembs/EXTERNAL-K011729_1894671_2
BACK
SAMPLE K011727_K011729_K011730_K011731_K011732_K011733_K011734_K011735_K011736_K011766_K011767_11_lane_gembs LANE EXTERNAL-K011729_1894671_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 19650378 | 100.00 % | 9825189 | 100.00 % | 9825189 | 100.00 % |
| General Reads | 15520134 | 78.98 % | 7820618 | 79.60 % | 7699516 | 78.37 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 16 | 0.00 % | 8 | 0.00 % | 8 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4130228 | 21.02 % | 2004563 | 20.40 % | 2125665 | 21.63 % |
| Bisulfite_reads C2T | 8017000 | 40.80 % | 4038923 | 41.11 % | 3978077 | 40.49 % |
| Bisulfite_reads G2A | 7503150 | 38.18 % | 3781703 | 38.49 % | 3721447 | 37.88 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 6021841 |
| Average Unique | 61.29 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 492797883 | 33.00 % | 201114359 | 26.93 % | 291683524 | 39.06 % |
| Base Counts Overall C | 238445834 | 15.97 % | 60119177 | 8.05 % | 178326657 | 23.88 % |
| Base Counts Overall G | 250290571 | 16.76 % | 184013193 | 24.64 % | 66277378 | 8.88 % |
| Base Counts Overall T | 491381244 | 32.90 % | 291523555 | 39.04 % | 199857689 | 26.76 % |
| Base Counts Overall N | 20513196 | 1.37 % | 9944080 | 1.33 % | 10569116 | 1.42 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 7469671 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 9825189 |
| 75 | 9825189 |
Insert Size Plot
| Insert Size Histogram |
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