/EXTERNAL BLUEPRINT/K011727_K011729_K011730_K011731_K011732_K011733_K011734_K011735_K011736_K011766_K011767_11_lane_gembs/EXTERNAL-K011730_1894672_2
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SAMPLE K011727_K011729_K011730_K011731_K011732_K011733_K011734_K011735_K011736_K011766_K011767_11_lane_gembs LANE EXTERNAL-K011730_1894672_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 19172258 | 100.00 % | 9586129 | 100.00 % | 9586129 | 100.00 % |
| General Reads | 13938172 | 72.70 % | 7029971 | 73.33 % | 6908201 | 72.06 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 4 | 0.00 % | 2 | 0.00 % | 2 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5234082 | 27.30 % | 2556156 | 26.67 % | 2677926 | 27.94 % |
| Bisulfite_reads C2T | 7209460 | 37.60 % | 3635354 | 37.92 % | 3574106 | 37.28 % |
| Bisulfite_reads G2A | 6728716 | 35.10 % | 3394619 | 35.41 % | 3334097 | 34.78 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 5399268 |
| Average Unique | 56.32 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 466261493 | 32.00 % | 196605292 | 26.99 % | 269656201 | 37.01 % |
| Base Counts Overall C | 247131401 | 16.96 % | 76427425 | 10.49 % | 170703976 | 23.43 % |
| Base Counts Overall G | 260414810 | 17.87 % | 177192222 | 24.32 % | 83222588 | 11.42 % |
| Base Counts Overall T | 463283323 | 31.80 % | 268619087 | 36.87 % | 194664236 | 26.72 % |
| Base Counts Overall N | 20000581 | 1.37 % | 9701778 | 1.33 % | 10298803 | 1.41 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 6709055 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 9586129 |
| 75 | 9586129 |
Insert Size Plot
| Insert Size Histogram |
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