/EXTERNAL BLUEPRINT/K011727_K011729_K011730_K011731_K011732_K011733_K011734_K011735_K011736_K011766_K011767_11_lane_gembs/EXTERNAL-K011732_1894674_2
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SAMPLE K011727_K011729_K011730_K011731_K011732_K011733_K011734_K011735_K011736_K011766_K011767_11_lane_gembs LANE EXTERNAL-K011732_1894674_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 17569380 | 100.00 % | 8784690 | 100.00 % | 8784690 | 100.00 % |
| General Reads | 13007784 | 74.04 % | 6555046 | 74.62 % | 6452738 | 73.45 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 9 | 0.00 % | 4 | 0.00 % | 5 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4561587 | 25.96 % | 2229640 | 25.38 % | 2331947 | 26.55 % |
| Bisulfite_reads C2T | 6734101 | 38.33 % | 3393081 | 38.62 % | 3341020 | 38.03 % |
| Bisulfite_reads G2A | 6273692 | 35.71 % | 3161969 | 35.99 % | 3111723 | 35.42 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 5055136 |
| Average Unique | 57.54 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 431274930 | 32.30 % | 178031114 | 26.67 % | 253243816 | 37.93 % |
| Base Counts Overall C | 222803091 | 16.69 % | 64923164 | 9.72 % | 157879927 | 23.65 % |
| Base Counts Overall G | 233487955 | 17.49 % | 163071429 | 24.43 % | 70416526 | 10.55 % |
| Base Counts Overall T | 429351912 | 32.15 % | 252719560 | 37.85 % | 176632352 | 26.46 % |
| Base Counts Overall N | 18354992 | 1.37 % | 8891173 | 1.33 % | 9463819 | 1.42 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 6262938 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 8784690 |
| 75 | 8784690 |
Insert Size Plot
| Insert Size Histogram |
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