/EXTERNAL BLUEPRINT/K011727_K011729_K011730_K011731_K011732_K011733_K011734_K011735_K011736_K011766_K011767_11_lane_gembs/EXTERNAL-K011733_1894675_2
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SAMPLE K011727_K011729_K011730_K011731_K011732_K011733_K011734_K011735_K011736_K011766_K011767_11_lane_gembs LANE EXTERNAL-K011733_1894675_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 19009170 | 100.00 % | 9504585 | 100.00 % | 9504585 | 100.00 % |
| General Reads | 12838707 | 67.54 % | 6475361 | 68.13 % | 6363346 | 66.95 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 12 | 0.00 % | 7 | 0.00 % | 5 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6170451 | 32.46 % | 3029217 | 31.87 % | 3141234 | 33.05 % |
| Bisulfite_reads C2T | 6633445 | 34.90 % | 3344820 | 35.19 % | 3288625 | 34.60 % |
| Bisulfite_reads G2A | 6205274 | 32.64 % | 3130548 | 32.94 % | 3074726 | 32.35 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 4959061 |
| Average Unique | 52.18 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 457946238 | 31.70 % | 194254658 | 26.89 % | 263691580 | 36.50 % |
| Base Counts Overall C | 248516061 | 17.20 % | 77703037 | 10.76 % | 170813024 | 23.65 % |
| Base Counts Overall G | 260494882 | 18.03 % | 176172666 | 24.39 % | 84322216 | 11.67 % |
| Base Counts Overall T | 457898164 | 31.70 % | 264598860 | 36.63 % | 193299304 | 26.76 % |
| Base Counts Overall N | 19841575 | 1.37 % | 9619239 | 1.33 % | 10222336 | 1.42 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 6168694 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 9504585 |
| 75 | 9504585 |
Insert Size Plot
| Insert Size Histogram |
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