/EXTERNAL BLUEPRINT/K011727_K011729_K011730_K011731_K011732_K011733_K011734_K011735_K011736_K011766_K011767_11_lane_gembs/EXTERNAL-K011734_1894676_2
BACK
SAMPLE K011727_K011729_K011730_K011731_K011732_K011733_K011734_K011735_K011736_K011766_K011767_11_lane_gembs LANE EXTERNAL-K011734_1894676_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 19260540 | 100.00 % | 9630270 | 100.00 % | 9630270 | 100.00 % |
| General Reads | 16605558 | 86.22 % | 8366807 | 86.88 % | 8238751 | 85.55 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1 | 0.00 % | 1 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2654981 | 13.78 % | 1263462 | 13.12 % | 1391519 | 14.45 % |
| Bisulfite_reads C2T | 8609105 | 44.70 % | 4336826 | 45.03 % | 4272279 | 44.36 % |
| Bisulfite_reads G2A | 7996454 | 41.52 % | 4029982 | 41.85 % | 3966472 | 41.19 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 6443349 |
| Average Unique | 66.91 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 503198376 | 34.38 % | 200145908 | 27.35 % | 303052468 | 41.41 % |
| Base Counts Overall C | 214522504 | 14.66 % | 38942571 | 5.32 % | 175579933 | 23.99 % |
| Base Counts Overall G | 225927375 | 15.43 % | 181815131 | 24.84 % | 44112244 | 6.03 % |
| Base Counts Overall T | 500021409 | 34.16 % | 301249283 | 41.16 % | 198772126 | 27.16 % |
| Base Counts Overall N | 20131376 | 1.38 % | 9747627 | 1.33 % | 10383749 | 1.42 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 7996910 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 9630270 |
| 75 | 9630270 |
Insert Size Plot
| Insert Size Histogram |
 |