/EXTERNAL BLUEPRINT/K011727_K011729_K011730_K011731_K011732_K011733_K011734_K011735_K011736_K011766_K011767_11_lane_gembs/EXTERNAL-K011735_1894677_2
BACK
SAMPLE K011727_K011729_K011730_K011731_K011732_K011733_K011734_K011735_K011736_K011766_K011767_11_lane_gembs LANE EXTERNAL-K011735_1894677_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 24380552 | 100.00 % | 12190276 | 100.00 % | 12190276 | 100.00 % |
| General Reads | 20578445 | 84.41 % | 10361051 | 84.99 % | 10217394 | 83.82 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 10 | 0.00 % | 5 | 0.00 % | 5 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3802097 | 15.59 % | 1829220 | 15.01 % | 1972877 | 16.18 % |
| Bisulfite_reads C2T | 10620925 | 43.56 % | 5346305 | 43.86 % | 5274620 | 43.27 % |
| Bisulfite_reads G2A | 9957530 | 40.84 % | 5014751 | 41.14 % | 4942779 | 40.55 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 8136397 |
| Average Unique | 66.74 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 595268579 | 32.13 % | 258827397 | 27.94 % | 336441182 | 36.31 % |
| Base Counts Overall C | 311754337 | 16.83 % | 104818445 | 11.31 % | 206935892 | 22.34 % |
| Base Counts Overall G | 324289780 | 17.50 % | 212602818 | 22.95 % | 111686962 | 12.06 % |
| Base Counts Overall T | 596149391 | 32.17 % | 337874896 | 36.47 % | 258274495 | 27.88 % |
| Base Counts Overall N | 25459865 | 1.37 % | 12337420 | 1.33 % | 13122445 | 1.42 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 9948194 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 12190276 |
| 75 | 12190276 |
Insert Size Plot
| Insert Size Histogram |
 |