/EXTERNAL BLUEPRINT/K011727_K011729_K011730_K011731_K011732_K011733_K011734_K011735_K011736_K011766_K011767_11_lane_gembs/EXTERNAL-K011736_1894678_2
BACK
SAMPLE K011727_K011729_K011730_K011731_K011732_K011733_K011734_K011735_K011736_K011766_K011767_11_lane_gembs LANE EXTERNAL-K011736_1894678_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 18681916 | 100.00 % | 9340958 | 100.00 % | 9340958 | 100.00 % |
| General Reads | 11305403 | 60.52 % | 5696552 | 60.98 % | 5608851 | 60.05 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 13 | 0.00 % | 6 | 0.00 % | 7 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7376500 | 39.48 % | 3644400 | 39.02 % | 3732100 | 39.95 % |
| Bisulfite_reads C2T | 5844209 | 31.28 % | 2944412 | 31.52 % | 2899797 | 31.04 % |
| Bisulfite_reads G2A | 5461207 | 29.23 % | 2752146 | 29.46 % | 2709061 | 29.00 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 4382095 |
| Average Unique | 46.91 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 419637087 | 29.56 % | 185147951 | 26.08 % | 234489136 | 33.03 % |
| Base Counts Overall C | 274524923 | 19.34 % | 107547013 | 15.15 % | 166977910 | 23.52 % |
| Base Counts Overall G | 287358867 | 20.24 % | 172423530 | 24.29 % | 114935337 | 16.19 % |
| Base Counts Overall T | 418790408 | 29.50 % | 235339807 | 33.15 % | 183450601 | 25.84 % |
| Base Counts Overall N | 19514331 | 1.37 % | 9454507 | 1.33 % | 10059824 | 1.42 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 5443994 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 9340958 |
| 75 | 9340958 |
Insert Size Plot
| Insert Size Histogram |
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