/EXTERNAL BLUEPRINT/K011727_K011729_K011730_K011731_K011732_K011733_K011734_K011735_K011736_K011766_K011767_11_lane_gembs/EXTERNAL-K011766_1894708_2
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SAMPLE K011727_K011729_K011730_K011731_K011732_K011733_K011734_K011735_K011736_K011766_K011767_11_lane_gembs LANE EXTERNAL-K011766_1894708_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 51436686 | 100.00 % | 25718343 | 100.00 % | 25718343 | 100.00 % |
| General Reads | 45025065 | 87.53 % | 22672240 | 88.16 % | 22352825 | 86.91 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 5 | 0.00 % | 3 | 0.00 % | 2 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6411616 | 12.47 % | 3046100 | 11.84 % | 3365516 | 13.09 % |
| Bisulfite_reads C2T | 23294055 | 45.29 % | 11726947 | 45.60 % | 11567108 | 44.98 % |
| Bisulfite_reads G2A | 21731015 | 42.25 % | 10945296 | 42.56 % | 10785719 | 41.94 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 17543247 |
| Average Unique | 68.21 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 1354077022 | 34.64 % | 539898461 | 27.62 % | 814178561 | 41.65 % |
| Base Counts Overall C | 565716640 | 14.47 % | 102480446 | 5.24 % | 463236194 | 23.70 % |
| Base Counts Overall G | 594173471 | 15.20 % | 478305988 | 24.47 % | 115867483 | 5.93 % |
| Base Counts Overall T | 1341486032 | 34.32 % | 807880995 | 41.33 % | 533605037 | 27.30 % |
| Base Counts Overall N | 53734971 | 1.37 % | 26028178 | 1.33 % | 27706793 | 1.42 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 21720255 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 25718343 |
| 75 | 25718343 |
Insert Size Plot
| Insert Size Histogram |
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