/EXTERNAL BLUEPRINT/K011727_K011729_K011730_K011731_K011732_K011733_K011734_K011735_K011736_K011766_K011767_11_lane_gembs

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SAMPLE K011727_K011729_K011730_K011731_K011732_K011733_K011734_K011735_K011736_K011766_K011767_11_lane_gembs

Mapping Stats (Reads)

Concept	Total Reads	%	Pair One Reads	%	Pair Two Reads	%
Sequenced Reads	383415066	100.00 %	191707533	100.00 %	191707533	100.00 %
General Reads	320647850	83.63 %	161433314	84.21 %	159214536	83.05 %
Reads in Control sequences	0	0.00 %	0	0.00 %	0	0.00 %
Reads under conversion control	79	0.00 %	40	0.00 %	39	0.00 %
Reads over conversion control	0	0.00 %	0	0.00 %	0	0.00 %
Unmapped reads	62767137	16.37 %	30274179	15.79 %	32492958	16.95 %
Bisulfite_reads C2T	165968287	43.29 %	83541799	43.58 %	82426488	43.00 %
Bisulfite_reads G2A	154679642	40.34 %	77891555	40.63 %	76788087	40.05 %

Uniqueness (Fragments)

Concept	Value
Unique Fragments	123848176
Average Unique	64.60 %

Mapping Stats (Bases)

Concept	Total Bases	%	Pair One Bases	%	Pair Two Bases	%
Base Counts Overall A	9955922918	34.17 %	4017711374	27.58 %	5938211544	40.76 %
Base Counts Overall C	4375419633	15.02 %	965249926	6.63 %	3410169707	23.41 %
Base Counts Overall G	4571144838	15.69 %	3508886931	24.08 %	1062257907	7.29 %
Base Counts Overall T	9836693464	33.76 %	5883917824	40.38 %	3952775640	27.13 %
Base Counts Overall N	400364163	1.37 %	194006453	1.33 %	206357710	1.42 %

Bisulfite Conversion Rate

Bisulfite Conversion Type	Conversion Rate
Conversion Rate	NA
Over Conversion Rate	NA

Correct Pairs

Concept	Total Reads
Correct Pairs	153717792

Mapping Quality

Mapping Quality Histogram

Insert Size Plot

Insert Size Histogram

Mapping Lanes Reports

LANE REPORTS
EXTERNAL-K011767_1894709_2
EXTERNAL-K011730_1894672_2
EXTERNAL-K011736_1894678_2
EXTERNAL-K011727_1894669_2
EXTERNAL-K011766_1894708_2
EXTERNAL-K011732_1894674_2
EXTERNAL-K011734_1894676_2
EXTERNAL-K011731_1894673_2
EXTERNAL-K011729_1894671_2
EXTERNAL-K011733_1894675_2
EXTERNAL-K011735_1894677_2