/EXTERNAL BLUEPRINT/K010391_K011797_30libs_30_lane_gembs/EXTERNAL-K010392_1798634_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 20488082 | 100.00 % | 10244041 | 100.00 % | 10244041 | 100.00 % |
| General Reads | 17308265 | 84.48 % | 8793831 | 85.84 % | 8514434 | 83.12 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1286 | 0.01 % | 659 | 0.01 % | 627 | 0.01 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3178531 | 15.51 % | 1449551 | 14.15 % | 1728980 | 16.88 % |
| Bisulfite_reads C2T | 8934068 | 43.61 % | 4537045 | 44.29 % | 4397023 | 42.92 % |
| Bisulfite_reads G2A | 8375483 | 40.88 % | 4257445 | 41.56 % | 4118038 | 40.20 % |
| Concept | Value |
|---|---|
| Unique Fragments | 6569445 |
| Average Unique | 64.13 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 522087208 | 33.53 % | 213006367 | 27.36 % | 309080841 | 39.70 % |
| Base Counts Overall C | 235551512 | 15.13 % | 54984695 | 7.06 % | 180566817 | 23.19 % |
| Base Counts Overall G | 256367417 | 16.46 % | 188455354 | 24.21 % | 67912063 | 8.72 % |
| Base Counts Overall T | 521661843 | 33.50 % | 311817598 | 40.05 % | 209844245 | 26.95 % |
| Base Counts Overall N | 21426252 | 1.38 % | 10283102 | 1.32 % | 11143150 | 1.43 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.013940929147562307 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 8203058 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 10244041 |
| 75 | 10244041 |
| Insert Size Histogram |
|---|
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