/EXTERNAL BLUEPRINT/K010391_K011797_30libs_30_lane_gembs/EXTERNAL-K010393_1798635_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 19078408 | 100.00 % | 9539204 | 100.00 % | 9539204 | 100.00 % |
| General Reads | 13541465 | 70.98 % | 6885256 | 72.18 % | 6656209 | 69.78 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 443 | 0.00 % | 223 | 0.00 % | 220 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5536500 | 29.02 % | 2653725 | 27.82 % | 2882775 | 30.22 % |
| Bisulfite_reads C2T | 6987874 | 36.63 % | 3551223 | 37.23 % | 3436651 | 36.03 % |
| Bisulfite_reads G2A | 6554034 | 34.35 % | 3334256 | 34.95 % | 3219778 | 33.75 % |
| Concept | Value |
|---|---|
| Unique Fragments | 5112775 |
| Average Unique | 53.60 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 464782914 | 32.05 % | 195130210 | 26.92 % | 269652704 | 37.19 % |
| Base Counts Overall C | 239524117 | 16.52 % | 70077517 | 9.67 % | 169446600 | 23.37 % |
| Base Counts Overall G | 261844256 | 18.06 % | 177367145 | 24.47 % | 84477111 | 11.65 % |
| Base Counts Overall T | 463875959 | 31.99 % | 272829312 | 37.63 % | 191046647 | 26.35 % |
| Base Counts Overall N | 19931762 | 1.37 % | 9575320 | 1.32 % | 10356442 | 1.43 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | -0.0013078015869465904 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 6386486 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 9539204 |
| 75 | 9539204 |
| Insert Size Histogram |
|---|
 |