/EXTERNAL BLUEPRINT/K010391_K011797_30libs_30_lane_gembs/EXTERNAL-K010394_1798636_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 12374232 | 100.00 % | 6187116 | 100.00 % | 6187116 | 100.00 % |
| General Reads | 9136743 | 73.84 % | 4634818 | 74.91 % | 4501925 | 72.76 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 71 | 0.00 % | 35 | 0.00 % | 36 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3237418 | 26.16 % | 1552263 | 25.09 % | 1685155 | 27.24 % |
| Bisulfite_reads C2T | 4717515 | 38.12 % | 2392467 | 38.67 % | 2325048 | 37.58 % |
| Bisulfite_reads G2A | 4419299 | 35.71 % | 2242386 | 36.24 % | 2176913 | 35.18 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3461625 |
| Average Unique | 55.95 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 309043554 | 32.86 % | 127148685 | 27.04 % | 181894869 | 38.68 % |
| Base Counts Overall C | 148633407 | 15.80 % | 37993568 | 8.08 % | 110639839 | 23.53 % |
| Base Counts Overall G | 161607495 | 17.18 % | 115539290 | 24.57 % | 46068205 | 9.80 % |
| Base Counts Overall T | 308225358 | 32.77 % | 183329751 | 38.99 % | 124895607 | 26.56 % |
| Base Counts Overall N | 12931818 | 1.38 % | 6209522 | 1.32 % | 6722296 | 1.43 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4320439 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 6187116 |
| 75 | 6187116 |
| Insert Size Histogram |
|---|
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