/EXTERNAL BLUEPRINT/K010391_K011797_30libs_30_lane_gembs/EXTERNAL-K010395_1798637_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 12098830 | 100.00 % | 6049415 | 100.00 % | 6049415 | 100.00 % |
| General Reads | 9018454 | 74.54 % | 4575351 | 75.63 % | 4443103 | 73.45 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 138 | 0.00 % | 70 | 0.00 % | 68 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3080238 | 25.46 % | 1473994 | 24.37 % | 1606244 | 26.55 % |
| Bisulfite_reads C2T | 4650235 | 38.44 % | 2358413 | 38.99 % | 2291822 | 37.89 % |
| Bisulfite_reads G2A | 4368357 | 36.11 % | 2217008 | 36.65 % | 2151349 | 35.56 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3436273 |
| Average Unique | 56.80 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 296220524 | 32.22 % | 122829077 | 26.72 % | 173391447 | 37.71 % |
| Base Counts Overall C | 150237751 | 16.34 % | 41681933 | 9.07 % | 108555818 | 23.61 % |
| Base Counts Overall G | 164342945 | 17.87 % | 113016555 | 24.58 % | 51326390 | 11.16 % |
| Base Counts Overall T | 296069455 | 32.20 % | 176156139 | 38.32 % | 119913316 | 26.08 % |
| Base Counts Overall N | 12640405 | 1.37 % | 6071836 | 1.32 % | 6568569 | 1.43 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | -0.060923746000181606 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4276878 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 6049415 |
| 75 | 6049415 |
| Insert Size Histogram |
|---|
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