/EXTERNAL BLUEPRINT/K010391_K011797_30libs_30_lane_gembs/EXTERNAL-K010396_1798638_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 11857312 | 100.00 % | 5928656 | 100.00 % | 5928656 | 100.00 % |
| General Reads | 9096419 | 76.72 % | 4628883 | 78.08 % | 4467536 | 75.35 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 457 | 0.00 % | 228 | 0.00 % | 229 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2760436 | 23.28 % | 1299545 | 21.92 % | 1460891 | 24.64 % |
| Bisulfite_reads C2T | 4691346 | 39.57 % | 2386185 | 40.25 % | 2305161 | 38.88 % |
| Bisulfite_reads G2A | 4405530 | 37.15 % | 2242926 | 37.83 % | 2162604 | 36.48 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3434982 |
| Average Unique | 57.94 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 288506458 | 32.02 % | 121512912 | 26.97 % | 166993546 | 37.06 % |
| Base Counts Overall C | 148736561 | 16.51 % | 44467743 | 9.87 % | 104268818 | 23.14 % |
| Base Counts Overall G | 163354250 | 18.13 % | 109289046 | 24.26 % | 54065204 | 12.00 % |
| Base Counts Overall T | 288158031 | 31.98 % | 169357655 | 37.59 % | 118800376 | 26.37 % |
| Base Counts Overall N | 12400412 | 1.38 % | 5950500 | 1.32 % | 6449912 | 1.43 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | -0.05606966122789974 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4289363 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 5928656 |
| 75 | 5928656 |
| Insert Size Histogram |
|---|
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