/EXTERNAL BLUEPRINT/K010391_K011797_30libs_30_lane_gembs/EXTERNAL-K010397_1798639_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 13410398 | 100.00 % | 6705199 | 100.00 % | 6705199 | 100.00 % |
| General Reads | 9777531 | 72.91 % | 4976305 | 74.22 % | 4801226 | 71.60 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1634 | 0.01 % | 850 | 0.01 % | 784 | 0.01 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3631233 | 27.08 % | 1728044 | 25.77 % | 1903189 | 28.38 % |
| Bisulfite_reads C2T | 5045327 | 37.62 % | 2566791 | 38.28 % | 2478536 | 36.96 % |
| Bisulfite_reads G2A | 4733838 | 35.30 % | 2410364 | 35.95 % | 2323474 | 34.65 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3688773 |
| Average Unique | 55.01 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 323229569 | 31.71 % | 137155288 | 26.91 % | 186074281 | 36.51 % |
| Base Counts Overall C | 172048662 | 16.88 % | 52663728 | 10.33 % | 119384934 | 23.43 % |
| Base Counts Overall G | 186042578 | 18.25 % | 124338863 | 24.40 % | 61703715 | 12.11 % |
| Base Counts Overall T | 323864578 | 31.78 % | 188706795 | 37.03 % | 135157783 | 26.52 % |
| Base Counts Overall N | 14004861 | 1.37 % | 6730450 | 1.32 % | 7274411 | 1.43 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | -0.11390623821311381 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4604337 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 6705199 |
| 75 | 6705199 |
| Insert Size Histogram |
|---|
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